Category: Master’s Students

4Cs Science Communication Writing Competition – 3rd Place

by Sarah Hayes, PhD student in the School of Public Health

How can we maintain mans’ best friendship? 

Here in the UK we think of dogs as mans’ best friend. But in some regions of the world they can be our deadliest enemy.

Meet Amos (name changed to protect identity).

He’s a 5-year-old boy living in rural Tanzania.

Ten days ago, he was bitten by a rabid dog.

Anyone exposed to rabies through a bite, scratch or lick from an infected animal must receive treatment immediately. A course of 3 vaccinations (known as post-exposure prophylaxis or ‘PEP’) will effectively protect a person from this deadly virus. But they must be given as soon as possible, ideally within 24 hours of the bite. Once signs of disease develop there is no effective treatment and you’re condemned to a painful, distressing death.

Amos hasn’t had these vaccinations.

Why?

Because in rural Tanzania, access to healthcare can be extremely challenging. Sometimes it’s a lack of awareness of the risks that stops people seeking treatment. At other times it’s a lack of access to healthcare. In Amos’s case the nearest hospital able to provide PEP was over 2 hours away.

Typical Road conditions

 

Transport costs alone can be prohibitive to some families. Add on the price of treatment and you begin to understand why an estimated 59,000 people a year(1) are still dying of this preventable disease.

So, how can we protect children like Amos?

Vaccination of domestic dogs plays a key part. Whilst any mammal can be infected with rabies, domestic dogs are responsible for up to 99% of human rabies cases (2). If we reduce the level of rabies in dogs, we reduce the level in humans.

However, the benefits of dog vaccination campaigns can be compromised if rabies is circulating in other animals. Our research shows that in southern Tanzania where Amos lives, almost 50% of recently reported animal rabies cases have been in jackals. These jackals may have been infected by rabid dogs, but rabies could also be passing from jackal to jackal. Understanding the role that different species play in rabies transmission is vital in implementing effective control strategies. If rabies is being maintained in wildlife, vaccination of domestic dogs alone may not be enough.

Using a combination of ongoing surveillance, statistical analysis and mathematical modelling, my research is investigating the role of different species in rabies transmission in southern Tanzania. These techniques allow us to untangle the part each species is playing in virus transmission and to consider both the short- and long-term effectiveness of different control strategies. This is vital if we are to stamp out rabies from these communities and keep it out.

Thankfully, Amos did ultimately receive his vaccinations. But not everybody will be so lucky. Which is why it’s so important that we tackle rabies at its source and prevent people from being exposed in the first place. And if we can achieve this then who knows, maybe one day people the world over will be able to think of dogs as their best friends.

References

  1. Hampson K, Coudeville L, Lembo T, Sambo M, Kieffer A, Attlan M, et al. Estimating the Global Burden of Endemic Canine Rabies. PLoS Negl Trop Dis. 2015;9(4).
  2. World Health Organization. WHO | Rabies. Who. 2017; Available from: http://www.who.int/mediacentre/factsheets/fs099/en/

4Cs Science Communication Writing Competition – 2nd Place

by Oluwalogbon Akinnola, PhD student in the Department of Bioengineering

The Other Hand Model

If the first thing you think of when you hear the phrase ‘hand model’ is David Duchovny in the 2001 film Zoolander, then congratulations on your excellent taste. Unfortunately, however, no one was willing to fund a PhD researching his performance. No, in the world of Biomechanics hand model means something different yet no less appealing.

Our hands are how we communicate and manipulate the world around us. Feeding ourselves, checking the bathwater, even holding the medium this text is printed on: we use our hands to keep us healthy, happy, and safe. Understandably, this multifunctional system is complex. One quarter of the bones in the body are in the hands. They controlled by an intricate network of muscles and nerves that provide the most tactile feedback in the body and let us do everything from handstands to card tricks.  It is this complexity that makes it difficult to find a solution when things go wrong. Hand injury accounts for almost a fifth of cases at A&Es across the country and the UK spends over £100million a year treating them. Osteoarthritis of the hand affects at least 1.56 million people in the UK and there is no known cure. Understanding exactly how the hand works is vital to finding appropriate solutions to these problems.

My research is concerned with creating an accurate representation of the human hand. Specifically, I’m using mathematical equations and experimental data to create a computer simulation that will replicate the behaviour of the hand in various conditions. This will allow us to investigate nonhealthy hands and gain insight into how to heal them. The model I have been working on is an inverse kinematic model. This means that it works out the forces inside the hand from the movements, or kinematics, of the hand. For example, what is the force on your wrist when you pick up a cup? Motion capture, the same technology Andy Serkis used to give us Gollum, is used to provide the motion input for the model and the results are verified using cadaveric testing and electromyography (EMG).

A hand model ready for motion capture with EMG sensors and reflective markers.

EMG is the detection of the electrical signal produced by your muscles when they move and gives an indication of how much effort the muscle is exerting. In cadaveric testing, we apply forces to the tendons in a hand and measure the kinematics. Imagine Thing from The Addam’s Family but with pulleys. I compare the signal patterns and applied forces to the model results to verify that the model. With all three in agreement, I can conclude that the model is representative of the hand. Thus, it can be used to simulate the effects of surgery and rehabilitation to find the best solutions to hand injuries and diseases. Solutions that could change millions of lives for the better. This hand model may not be wearing diamond ring but I think it pretty exquisite.

4Cs Science Communication Writing Competition – 1st Place

by Stephanie Martin, MRes student in the Department of Life Sciences

Dear Present

Dear Sister,

I recently had an experience which reminded me of the stories Grandma used to tell us. I was hiding in what I thought was an animal’s den after being chased by water-raiders through the desert. The den turned out to be a large chamber, full of nothing except hundreds and hundreds of binders and a sign which said ‘The Daintree Rainforest – Lest We Forget.’

Do you remember what Grandma used to tell us about the Daintree? That luscious mythical jungle that used to inhabit these lands in Australia that we never really believed ever existed. I have included in this letter an old photograph that I found in an album marked ‘2019’, everything she told us about is there; trees too tall to climb, six-foot tall birds of electric blue running through the undergrowth, flowers, butterflies, and frogs… they’re all there.

The binders were full of scientific research from ages past. One paper caught my attention, ‘An Investigation into the Physiology of Trees and Lianas under Experimental Drought Conditions – by Stephanie Martin.’ I read the paper, taking in the (extremely sophisticated) statistical analyses and reading the (detailed and worthy of a distinction) manuscript written by this long since departed Master’s student. ‘Access to the rainforest canopy was gained via a crane’ she writes, ‘measurements were taken from tree species under standard tropical rainforest conditions, as well as those included in the drought experiment.’ I am jealous of this person’s existence in a time when they had to simulate drought conditions when we have lived through it our whole lives!

She goes on to detail her research, which I think you will find interesting. An instrument called a porometer was used to measure stomatal conductance; the rate of carbon dioxide entering and water vapour exiting the leaves via pores called stomata. The drought experiment covered 0.4ha and was evidently constructed using a series of clear-panel plastic roofing structures.

I’ll skip over the Results and Discussion sections, which were written in August 2019, and share with you the passage that has affected me most;

‘The simulated drought conditions reflect a possible future where seasonal rainforests experience hotter and longer dry seasons as a result of climate change. This project is important as global temperatures are set to increase by at least 2 °C degrees by the year 2100 (Raftery et al., 2017). It is essential that we assess the impact this warming effect may have on carbon sinks such as tropical rainforests in order to formulate management plans and influence governments and corporations to take action to prevent dangerous warming scenarios.’

It’s difficult to comprehend the magnitude of failure our ancestors caused when they ignored scientists calling for action to prevent climate change, resulting in a world now where people kill one another for water, and where rainforests are nothing but ancient history.

Maybe one-day things will get better.

All my love,

Your sister.

Making sustainability tangible: experiences from a workshop for postgraduate students

The sustainability workshop was organised by PhD student Vasiliki Kioupi of the Centre for Environmental Policy (CEP) on November 13 2018. It was an opportunity for postgraduate students from different departments of Imperial College London and other Universities to participate in two sessions related to materials and circular economy and assessment of the sustainability of a proposed technology in the context of the problem-solving approach. Moreover, the aim was for the participants to develop skills related to collaboration, systems and strategic thinking.

Twenty PhD students from CEP and Design Engineering Departments as well as a CEP Teaching Fellow and a post-graduate student from Queen Mary University joined the workshop. The event also featured two facilitators for delivering the two sessions; Katherine Whalen from Lund University and Tatiana Vakhitova from Granta Design.

The first session introduced participants to a serious game (In the loop) where they had to work in teams of two and assume the roles of product manufacturing companies making decisions in a changing economic, political and social system. During the reflection session after the game there were lively discussions about elements of competition that surprised the participants, how sustainability is approached, how short and long term strategies affect the course of the game, economic and environmental regulations that should be applied and social issues that emerge from the game. Finally, they came up with suggestions for companies and policy makers in the materials and product manufacturing sector. A very interesting element of the first session was the high degree of participant engagement during the game.

The second session introduced participants to the active learning toolkit “sustainable development”, which is a set of steps that can be used to assess the sustainability of a proposed technology. The case study used was about electric vehicles (EV) and sustainability was assessed on the basis of three capitals: natural, manufactured and social using back-casting, stakeholder analysis, data collection on EV life cycle: CO2 emissions, materials and energy and EU regulations using CES Edupack (software available to ICL students of specific departments via the ICT shop). During the reflection session the participants had the opportunity to discuss not only how this process could be potentially useful for their research or teaching about sustainability, but also the importance of systems thinking in decision-making and interdisciplinary collaboration in addressing sustainability challenges.

Overall, the workshop gave the opportunity to participants to discuss about what sustainability means to them, interact in teams, learn about new concepts, further develop some skills and think about limitations of policy-making as well as suggestions for a more holistic view of sustainability. As for the organiser, it was an important opportunity to develop organisation, collaboration and management skills and use the feedback generated to improve the participant experience and learning outcomes of future workshops.

The workshop was made possible through the generous support of the Graduate School who provided funding and guidance.

Theory Group Student Seminars: Sharing Our PhD ‘Wisdom’

One of the most important skills of any physicist, second only to the ability to do research itself, is to communicate both the results and the methods of that research to a variety of audiences: students, peers, senior researchers, and to a lesser extent, the general public. All of these groups require their own unique approach, and it is to the first two that the student seminars in the theoretical physics department at Imperial are aimed. The speakers are PhD students, the audience consists of PhD and MSc students in comparable proportions. This is a pedagogical experience for all involved, albeit in different ways.

Firstly, the speaker. Choosing a subject for a talk is a nontrivial task in itself. The choice might be, roughly, between the day to day research of the speaker, maybe an upcoming paper, and a broader, less directly related topic, with which the speaker had to familiarise themselves in order to perform their research, not having learnt about it in class. Sometimes, these are useful tools; sometimes, these are topics which are interesting in and of themselves. Whichever subject is chosen, having to talk about this to an audience is an excellent self check – have I truly understood what I am talking about? What is the broader picture here, what is the forest behind the trees and leaves of equations? A variety of wise human have said, in more or less these words, that one has not truly understood that which one cannot explain to a computer, or an undergraduate. Since both of these would take considerable amounts of time, postgraduate students will have to suffice.

Giving a talk is a skill which is valuable both to future academics as well as those who go on to work in what is known with varying degrees of derision as “real life”. How to be engaging, how to be clear, how to estimate the level of knowledge of the audience, adapt the talk if that estimate proves to be inadequate. Choosing suitable visualization tools: the chalk vs. the powerpoint!

Secondly, the audience. It is a rough awakening to go to a talk for the first time. However complicated a lecture seemed to be, the knowledge the professor assumed you to have was always knowledge that you knew you should hypothetically have. It is an art in itself to not be discouraged and stop listening the second one does not understand something. A good speaker will usually try to give you “the gist of it”, and it is possible to understand a number of things without understanding anywhere near all the detail. It is an excellent opportunity for MSc students to be given the chance to listen to a talk that is less complicated than a full fledged conference talk, but still more complicated than any seminar talk they would have previously come across.

The other PhD students might learn some of the actual material which is being presented, as well as give some valuable feedback (“no, you may not assume everybody knows what diffeomorphism invariance is”, “no, don’t print black on a red background on your slides”) .

Finally, it is a well known fact that students are being underpaid and hence underfed, and therefore free pizza provides a most useful tool to lure the starving students in, as well as feed them. Bon appetit!

We would like to extend our thanks to the Graduate School’s Research Community Fund for sponsoring this event.

‘Breaking the Ice’ – Hammersmith Campus Postgraduate Social!

Postgraduate students based at the Imperial Hammersmith Hospital campus took to the ice for a PG student social at the Natural History Museum on Wednesday the 19th of December. This social brought together research students from the departments of Medicine, Surgery & Cancer and the NHLI in a festive skating session followed by drinks at ħ bar, allowing PG students on the campus to mingle across different departments and disciplines.

The event was a great success, bringing together research students from across departments and institutes based at the Hammersmith hospital campus, as well as other research staff that were interested in getting involved with the event (including clinical and postdoctoral fellows). The Graduate School’s Research Community Fund, paid for twenty tickets for PGR students to go ice skating at the NHM (which sold out within 12 hours of the email being sent out) and a free drink at ħ bar, where PG students shared a festive drink as a way to send off the end of term before college closes.

This event was organised by campus-based PhD student representatives (Emily Heathward, with assistance from Hannah Maude and Berta Font Cunill), who’d like to improve the postgraduate research community in the Faculty of Medicine at the Hammersmith Campus, and serves as an introductory event, with high hopes for more to follow.

Thank you to the Graduate School for enabling this event to take place!

Mech Eng – Robotics Forum PhD Connect

by Eloise Matheson, PhD student in the Department of Mechanical Engineering

The first PhD networking event for robotics related researchers was held on Thursday 15th November 2018. Sponsored by the Imperial College Graduate School Research Community Fund and the supported by the Imperial College Robotics Forum (Network of Robotics), this event was aimed to connect PhD researchers across the college that face similar technical and research challenges! Robotics in general is a very multi-disciplinary topic, and with over 28 robotics labs spread across departments and faculties, this event was a great chance to bring people together. Over 50 people from 15 different labs registered for the event, with a turnout of around 40. It was a fantastic success, and the outputs of the afternoon have included ad hoc visits to other’s labs, the plan to form a mailing list between PhD/EngD researchers, future smaller social meetings and the hope to run the event annually.

The afternoon started with a short presentation by Prof. Ferdinando Rodriguez y Baena, the Speaker for the Robotics Forum, who highlighted the importance of creating links between our labs at all levels – including between PhDs and other researchers.

Keen to meet the other researchers in the audience, we then had a few minutes to introduce ourselves to someone we didn’t know – and following that, to introduce our new partner in a round circle to the rest of the group.

The group introduction helped break the ice, so that we could begin the main activity of the afternoon – intense speed meeting! We broke into pre-allocated smaller groups over three sessions each of 20 minutes, meaning that targeted discussions could take place. The first session grouped people from different labs together, and the topic encouraged them to talk about best practises from their labs. The second grouped people of similar research topics together – specifically covering Modelling and Simulation, Control, Mechanical Design, and Sensing and Electronics. The third and final group split us according to a more social demographic – with Post-Docs and later stage PhDs in one group, early PhDs in another, middle PhDs in the third and finally all the robotics female researchers together, so that they could discuss issues and exchange ideas pertinent to their experience.

To conclude a fantastic afternoon, we finished the event with food and drinks and a social networking opportunity. Thanks again to the Graduate School for enabling this event!

Football at the Molecular Science Research Hub

5-aside football at Imperial’s new White City Campus takes place very Wednesday lunch time between 12 and 1pm at PlayFootball Shepherds Bush, just A 5-minute walk away. The first event took place on the 7th November and will continue for 10 weeks. The aim of this event was to facilitate activity and departmental communication between staff, PhD students and masters students across all floors of the new Molecular Sciences Research Hub.

This summer, the Chemistry department was the first to move to the new White City Campus. The new building was designed to foster a sense of communication within the department and as the campus is still in development, there are currently little or no social areas, activity / sports spaces. With help from the graduate school and a local company, PlayFootball Shepherds Bush, we were able to negotiate 2 discounted 5-aside football pitches to provide fun, competitive and free exercise.

The turnout has been fantastic with over 70 people on the mailing list, all wanting to play. Players have come from a range of research groups from various sizes and a strong sense of community and appreciation for the project has been felt. As of this blog, 2 weeks of football have been played and we have been lucky enough to have had some great weather. Each session we have had 4 randomly picked teams with 2 games on each pitch lasting 30 minutes, winners playing winners and losers playing losers. The randomly picked teams have bonded a range of department members together from young MSci students to academic members of staff, both male and female. After the games, MSRHs new showers have also truly been put to the test…

At the end of the 10 weeks, we will have an awards ceremony congratulating all players for their effort, networking, and improved fitness and football skills. Due to the project’s initial success, we are considering alternative funding options for the future and would not have been able to start this project without the help of the Graduate School.

5 aside football at MSRH is open to all members of Imperial College London and welcomes all skill levels. Please email r.strutt17@ic.ac.uk to be added to the mailing list. 

Members of MSRH football, Rob Strutt and Mohit Devgan, organisers, in the centre (wearing trousers!). Advert distributed on screens around department.

Cross-CDT Ice Skating Event

by Martin Prießner, PhD student in the Department of Chemistry

On Tuesday the 11th of December the first event of this year’s Cross-CDT event series took place. The Cross-CDT event series aims to strengthen the already established friendships and form new ones between CDT students of different disciplines across the different cohort years. By organising meetings and fun activities with an informal character, the participating students get the opportunity to exchange their PhD experiences and professional and private matters. This enables them to form long-lasting friendships which will hopefully surpass their PhD studies.

On this winter-like evening on the 11th of December a total of 18 CDT students from 4 different CDT programs across two cohort years gathered together in front of the library at Imperial College London. Since not everyone knew everyone from the group, we briefly introduced each other and spoke a bit about how we found out about this event. In these conversations some of us found out that through the well-connected network within the CDT programs, we had already quite a few friends in common. After everyone arrived, we started walking to the ice rink at the Natural History Museum and got ready to demonstrate our skills on the ice!

Since there were some participants from countries in which the climate is naturally too warm to form ice, it was a first-time experience for them. With some of the more ‘advanced’ skaters helping those less able, everyone finally managed to get comfortable on the ice and most of us gathered at the Christmas tree in the centre of the ice rink for a nice group picture.

After roughly one hour we finished ice skating and rewarded ourselves with a drink at the bar, where we continued to exchange our experiences of the CDT program and the opportunities afforded to us as part of this cohort, e.g. helping organise the festival of science, which some members of the group had done the year before.

Following the skating, some of the group decided to go to the Bio-Eng-Christmas party in the Royal School of Mines to continue the evening!

To summarise this first Cross-CDT event was a very successful gathering of CDT-PhD students across different CDT years. We had a great time ice skating, celebrating and exchanging our experience of the PhD so far.

Thank you to the Graduate School of Imperial College London, for the financial support to ensure this cohort building activity could take place.

St. Mary’s Christmas Party 2018

by Inne Nauwelaers, PhD student at the National Heart and Lung Institute

On Wednesday, 12th of December 2018, students at St. Mary’s School of Medicine building got together for the second building-wide party. Thanks to the financial aid of the Graduate School, we were able to organise a Christmas party, bringing people together from every department at this campus: the School of Public Health, Virology, Respiratory medicine, Infectious Diseases and Paediatrics.

The reason we took the initiative and wanted to bring everyone together, is due to the fact that there is no communal space for people to gather and therefore interaction between departments is often limited.

This Christmas party brought students from different departments together and made it so much easier to start talking to each other. We decorated the room, putting up a ‘fire place’ and turned on some Christmas music. The relaxed atmosphere, along with the wine, beer, mince pies and snacks helped everyone to have fun and made interacting and talking to new people so much easier. New friendships and connections were formed as a result.

From 4pm onwards people showed up and had their first drink. Within half an hour, the entire room was full and people were eating and drinking, chatting to colleagues and talking to strangers. They enjoyed quiches, mini pork pies, sausages rolls, crisps and of course mince pies with a sip of bubbly, wine, beer or soft drinks. By 7pm, people were still chatting, but we had to start cleaning up. Rubbish was binned, glasses collected and washed, and the room was cleared of left overs. Several people were happy to help and spoke highly of this successful second Christmas party at St. Mary’s. Afterwards, several people moved to the pubs around to keep the evening going with their new friends. Merry Christmas!